BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026C09SP1|AL428523
(863 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1593 1645 0.0
>3x_Contig1593
Length = 10902
Score = 1645 bits (821), Expect = 0.0
Identities = 847/864 (98%), Gaps = 1/864 (0%)
Strand = Plus / Plus
Query: 1 gatcaaacttcaactccctagtttgttttcttttcccttttgccatttatagggttactt 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 8257 gatcaaacttcaactccctagtttgttttcttttcccttttgccatttaaagggttactt 8316
Query: 61 cattctcagttcataatattcatactgtgaatttagtttgaacatcgcttttcaacaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8317 cattctcagttcataatattcatactgtgaatttagtttgaacatcgcttttcaacaatt 8376
Query: 121 ttcgaacttagacatctacttctcacaatttcaatgaaaacgttcaatgagcgtttttat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8377 ttcgaacttagacatctacttctcacaatttcaatgaaaacgttcaatgagcgtttttat 8436
Query: 181 tgaacaataaactgttgcttttgtgttaacgactactggagccgatatcaaatagtagca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8437 tgaacaataaactgttgcttttgtgttaacgactactggagccgatatcaaatagtagca 8496
Query: 241 gacgccaattgctattcatctctagtcagctgtattgacctttttttttttgattctatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8497 gacgccaattgctattcatctctagtcagctgtattgacctttttttttttgattctatt 8556
Query: 301 attatttgacttccgtttgttttaaaggcattctgtagcatagaaagaaccaggaaaacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8557 attatttgacttccgtttgttttaaaggcattctgtagcatagaaagaaccaggaaaacc 8616
Query: 361 aatccaattctcgaacggtatatcctgacaattcaatttyatttatgtytcgtcgcgtgg 420
||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 8617 aatccaattctcgaacggtatatcctgacaattcaattttatttatgtttcgtcgcgtgg 8676
Query: 421 taactcctgtgaagccaggttatggtatcttgcgtaataatgcggggttaagggtaccgn 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8677 taactcctgtgaagccaggttatggtatcttgcgtaataatgcggggttaagggtaccgg 8736
Query: 481 tgttaccggtcccagcgcatgtsacgatgatagccggtggtaaacgatttgcttctagta 540
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 8737 tgttaccggtcccagcgcatgtgacgatgatagccggtggtaaacgatttgcttctagta 8796
Query: 541 atagcaattctgavaccggaac-gttacaaatactgctgccgcaacaacggataaagcta 599
||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 8797 atagcaattctgaaaccggaacggttacaaatactgctgccgcaacaacggataaagcta 8856
Query: 600 gtactggtgagttagttgatgcgtcaaaagcaccagccactaagccagtagctgcaaaga 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8857 gtactggtgagttagttgatgcgtcaaaagcaccagccactaagccagtagctgcaaaga 8916
Query: 660 wagagaagawacctcccttgtgggatagawttwwacacgagttgacccattacgtcaacg 719
|||||||| ||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 8917 aagagaagaaacctcccttgtgggatagaattaaacacgagttgacccattacgtcaacg 8976
Query: 720 gtacaaaacttttggggtatgakattwwwgtttccaccaagcttttggtgaagttcgtcc 779
|||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||
Sbjct: 8977 gtacaaaacttttggggtatgagattaaagtttccaccaagcttttggtgaagttcgtcc 9036
Query: 780 aaggttacgaactttcaagacgtgaaaagaatcaattgawgagaacaatgggtgatatct 839
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 9037 aaggttacgaactttcaagacgtgaaaagaatcaattgaagagaacaatgggtgatatct 9096
Query: 840 tccgtcttgttcccttcagtgcct 863
||||||||||||||||||||||||
Sbjct: 9097 tccgtcttgttcccttcagtgcct 9120
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 11,144
Number of Sequences: 1807
Number of extensions: 11144
Number of successful extensions: 80
Number of sequences better than 1.0e-20: 1
length of query: 863
length of database: 10,358,551
effective HSP length: 16
effective length of query: 847
effective length of database: 10,329,639
effective search space: 8749204233
effective search space used: 8749204233
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.5 bits)
S2: 50 (100.7 bits)